Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885185.1_cds_XP_016439182.1_34761
CDS Infomation

[gene=LOC107765090] [db_xref=GeneID:107765090] [protein=pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like isoform X2] [protein_id=XP_016439182.1] [location=join(2159..2404,3810..4964)] [gbkey=CDS]
Sequence

ATGATGAACAGAGCTACCTGTTTGAGGCTTCTTCGATCAACGACGACGTGTCGCCGATGG
TTCTCTACAGAAATGGAGGTGGCAGCGGCGACGGCGACGGTATCAACGCCGGCCATCACT
CAAAACAACCGAAGAAATGCGGGTCGCCGGAGATTATCGGACCTTATGAACAGAGCAGAC
CCGAATAAAACCAAATTTACAGATGCTCTGAATAAATTGCATAACGAAGGGAAACCTTTA
AGAAAGCTGTCTAAATGGATGGAAATCAGCAAAATTACGATCAGCGATGCCGACCGTGCA
ATACGGATAGACCTTCTGGCCAAGACAGAGGGCGCAGATTCAGCCGAAAAGTATTTTGAC
AGCCTGCAAGAATCTGAAAAAACTAGTAAAACCTATGGAGCAATTCTCTGGTGTTATTGC
AGGCAGAAAAAGTTGGATAAAGCTTTGAAGCTTTTTGAGGAGATGAAAGAGCTCAATTTT
GCATCTACCTTAAATTATAACAATGTGATATCTCTTTATTTAAGCAATGGCCAGCCTGAA
AAAGTCCCTCCACTGGTTCAAGAAATGGAGCAGACAAATATTGCAGCTGATTTATATACC
TATAATCAGTTGATGACCAGCTATGTTTCGGTAAAGGATATAGTATCAGTTGAGGATGTT
CTTGATAAGATGGAAAAGAATCAGGTAAAGTTGGACTGGTTTACGTATGGAAACCTAGCT
GGCATGTATATCAATACTGGCGACCTTGATAAGGCGAATGGTATTCTTCAAAAGATGGAG
AAATTAGAAGATATAAATGACCGTGAGGCATTCCACACCCTAATCACGTTGTATCAAAAA
ACATCTAATTCATCAGGAGTCAATCATGCATGGGAATCATTGAAGTCCGTTGTTCCAACT
CCCAGTAAGGTGAGCTATCTCATCGTGCTTGTGGCTTTATCCAAAGTAGGGGATTTGGAA
AACCTTGAGAAGTGTTTTAGAGAATGGGACACAGGCTGTAGACATGAAATCAGAATTTCA
AATGTGATGATAGAGTCCTACCTCAAAAGAAATATGATTGAAGAAGCAAATTCGGTTTAT
GAGAATGTGTTGAAACAAGGTGTTGAACCCAACTTAAGGACTTTTGGTGCATTCACAAAT
TACTATATAAAAAATACTCAGATAGATTTGGCTCTGAAGTATTTGGAGATGGGTGCCAGC
AAAAAGGCAAATCCCGAGAAACGTTGTTGGTTCCCTGTGGATGAAACCATCAAGATGTTT
CTAGCATACTTCGAGGATAATAATGACCCTGTCAGAGTTAAGACATTCTGCGAGATTATG
AAGAAGATTAATCGTCTTGATTCCACTGTACATGACTCTCTTCTAAGCAAAAGCTCTGCA
GCCTCTGAAGTGGAATTATGA

Peptide Sequence

PEP ID

XP_016439182.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MMNRATCLRLLRSTTTCRRWFSTEMEVAAATATVSTPAITQNNRRNAGRRRLSDLMNRAD
PNKTKFTDALNKLHNEGKPLRKLSKWMEISKITISDADRAIRIDLLAKTEGADSAEKYFD
SLQESEKTSKTYGAILWCYCRQKKLDKALKLFEEMKELNFASTLNYNNVISLYLSNGQPE
KVPPLVQEMEQTNIAADLYTYNQLMTSYVSVKDIVSVEDVLDKMEKNQVKLDWFTYGNLA
GMYINTGDLDKANGILQKMEKLEDINDREAFHTLITLYQKTSNSSGVNHAWESLKSVVPT
PSKVSYLIVLVALSKVGDLENLEKCFREWDTGCRHEIRISNVMIESYLKRNMIEEANSVY
ENVLKQGVEPNLRTFGAFTNYYIKNTQIDLALKYLEMGASKKANPEKRCWFPVDETIKMF
LAYFEDNNDPVRVKTFCEIMKKINRLDSTVHDSLLSKSSAASEVEL

Transcript Sequence

Gene sequence data has not been registered.